PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIM99832.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 111aa MW: 12117.5 Da PI: 3.8662 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 59.5 | 9.7e-19 | 7 | 65 | 43 | 101 |
DUF260 43 lkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 ++ ++lpe++r da++s+vyeA+ar+rdP+yG++g i lq+q+++l+aela++++e+ PIM99832.1 7 GNIFTELPEDQRADAVNSMVYEANARLRDPIYGCTGAICYLQNQISELQAELAKAQAEI 65 578899************************************************99875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 111 aa Download sequence |
MIVASLGNIF TELPEDQRAD AVNSMVYEAN ARLRDPIYGC TGAICYLQNQ ISELQAELAK 60 AQAEILNMQC QNASLSEVIS KQTLATQNGQ ENSNFLVDDG NLGVSWGSFW A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G07900.1 | 9e-24 | LBD family protein |