PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99517.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 354aa    MW: 38676.3 Da    PI: 6.0004
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.8e-10202250355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  PIM99517.1 202 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 250
                 58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MGSQELANGS SNLNCPTTDS LSDNVAGISM CLGGVEDPFY SFLGNSSMVP QNEFSNPHFS  60
LDNQTMGSSS HLVHFPSDSI LADVVPKIPS FGSRSFSEMV SSFGRHSNFP QDQGVKIQEN  120
CQNSEEGLLG TSHNGKRKRK NIEVEQKKDQ IGYTSELPED DEKKNVGANS HAVKLVKDNS  180
NSGEAPKENY IHVRAKRGQA TNSHSLAERV RRERISERMR LLQELVPGCN KITGKAVMLD  240
EIINYVQSLQ QQVEFLSMKL ATVNPELNVD IERILSKDIL QPLGGNPTAL GISPGLSSSH  300
PFPGLPPGSF NSFPGTAPSF HPLPLNLWNN ELQSILQMGF DSNPSVNGLS KMEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-67bHLH family protein