PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99177.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 277aa    MW: 29615 Da    PI: 7.622
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.99.8e-10160207455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  PIM99177.1 160 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYVQSLQ 207
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDPPLVNEAS FTAAANPSSY SLAGLLSFPT SGGSGGGGDL GLRMGSLGLA GGDDLEESTV  60
TEQSRSRYEN GGGKRKRVAG NCFIDGSSKL ASSSSADQDL NKSNIKRAKP SGSVHESGGS  120
RTEAEANSGT NIKPVEEKSK PEPPKDYIHV RARRGQATDS HSLAERARRE KISERMKILQ  180
DLVPGCNKVI GKALVLDEII NYVQSLQHQV EFLSMKLEAV NSRVTPAIEG FPSKDLTPAT  240
FDANGMVYGS QTPREYARGL QTEWLHMQIG SGFERGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.18e-71bHLH family protein