PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98999.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 1012aa MW: 112457 Da PI: 5.4966

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	36	82	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEde+l av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l PIM98999.1 36 KGQWTSEEDEILRMAVQRFQGKNWKKIAECFK-DRTDVQCLHRWQKVL 82 799**************************9.**********986 PP
2	Myb_DNA-binding	65.9	7.5e-21	88	134	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++++v+++G++ W+tIa++++ gR +kqc++rw+++l PIM98999.1 88 KGPWSKEEDEIIIELVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 134 79****************************.***********97 PP
3	Myb_DNA-binding	48.7	1.8e-15	140	182	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ PIM98999.1 140 KDAWTQEEELALIRAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 182 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1012 aa Download sequence
MEDRFRNTLS IGARDGIHRA PRLHGRTSGP TRRSTKGQWT SEEDEILRMA VQRFQGKNWK 60 KIAECFKDRT DVQCLHRWQK VLNPDLVKGP WSKEEDEIII ELVNKYGPKK WSTIAQHLPG 120 RIGKQCRERW HNHLNPGINK DAWTQEEELA LIRAHQIYGN KWAELTKFLP GRTDNAIKNH 180 WNSSVKKKLD MYLASGLLSQ VQGSPLVSHP NHSPAFASSK AQQSSEDDRD KAESEEASEC 240 SQGSNMANIS QSTDTVINRT EHHEETCKET EESSPIPCSE DYHPAFQEVT YKLPDVPCEL 300 SEKFLEHDIS LDWGTFAWKD WQVNRNELLD MSLLDLGQES SGPFMPSLTG KDNHETILSR 360 TETYMESGAS VSMENMVVDT DAPNPIANSD CKRIHSENGR DGYPAAIVIG YTGESVDSLL 420 NNCSNYQMPS HMLGTSFTQP LPIPTQLPPA DGSFMFGTNL DQYHYSSHVS AGQESIPPNT 480 HDGFIYAKES DCSSCKDDSN AEESNEAKRS PKLVPANDFV LATLNDSQCC SPKDKYPVES 540 DEKDSGALFY EPPRFPSLEV PFLSCDLISS DMNQEFSPLG IRQLMISSMT PFKLWDSPSR 600 DDSPASVLKS AAKSFTGTPS ILKKRHRDLV SPLSEKRCEK KLEGISKPES HSNQTNNVSR 660 LEVMFNECID QKVAVMSLSP KSKGNSKASC GYKENTAPAC EQAKNESNES VHFSESRISQ 720 KGNVSDFDQR TEQTAVAEVK TKAMVKDTTN VAKEFSGVLV EHDTNDLVFF SPDRFGNNSD 780 RSIGLSARAL GNQYSKRTDA VSKYGAVSSE TSSFTVLCSP HLHTKEGTNL VITTSMQSSS 840 PSQKRAESSD KGIAFENNSI FVETPFKRSI ESPSAWKSPW FINAFLPGAR VDTDITIEDI 900 GYFLSPGDQS YDAIGLMKQL GQQTASAFAD AQEVLGDETP ETLLKGKCST NLENNYNPNS 960 QTEHHSLSAP NFMTERRALD FSECGTPGKE TGKFSSSIGF SSPSSYLLKG CR

Sequence ? help Back to Top

Protein Sequence Length: 1012 aa Download sequence

MEDRFRNTLS IGARDGIHRA PRLHGRTSGP TRRSTKGQWT SEEDEILRMA VQRFQGKNWK  60
KIAECFKDRT DVQCLHRWQK VLNPDLVKGP WSKEEDEIII ELVNKYGPKK WSTIAQHLPG  120
RIGKQCRERW HNHLNPGINK DAWTQEEELA LIRAHQIYGN KWAELTKFLP GRTDNAIKNH  180
WNSSVKKKLD MYLASGLLSQ VQGSPLVSHP NHSPAFASSK AQQSSEDDRD KAESEEASEC  240
SQGSNMANIS QSTDTVINRT EHHEETCKET EESSPIPCSE DYHPAFQEVT YKLPDVPCEL  300
SEKFLEHDIS LDWGTFAWKD WQVNRNELLD MSLLDLGQES SGPFMPSLTG KDNHETILSR  360
TETYMESGAS VSMENMVVDT DAPNPIANSD CKRIHSENGR DGYPAAIVIG YTGESVDSLL  420
NNCSNYQMPS HMLGTSFTQP LPIPTQLPPA DGSFMFGTNL DQYHYSSHVS AGQESIPPNT  480
HDGFIYAKES DCSSCKDDSN AEESNEAKRS PKLVPANDFV LATLNDSQCC SPKDKYPVES  540
DEKDSGALFY EPPRFPSLEV PFLSCDLISS DMNQEFSPLG IRQLMISSMT PFKLWDSPSR  600
DDSPASVLKS AAKSFTGTPS ILKKRHRDLV SPLSEKRCEK KLEGISKPES HSNQTNNVSR  660
LEVMFNECID QKVAVMSLSP KSKGNSKASC GYKENTAPAC EQAKNESNES VHFSESRISQ  720
KGNVSDFDQR TEQTAVAEVK TKAMVKDTTN VAKEFSGVLV EHDTNDLVFF SPDRFGNNSD  780
RSIGLSARAL GNQYSKRTDA VSKYGAVSSE TSSFTVLCSP HLHTKEGTNL VITTSMQSSS  840
PSQKRAESSD KGIAFENNSI FVETPFKRSI ESPSAWKSPW FINAFLPGAR VDTDITIEDI  900
GYFLSPGDQS YDAIGLMKQL GQQTASAFAD AQEVLGDETP ETLLKGKCST NLENNYNPNS  960
QTEHHSLSAP NFMTERRALD FSECGTPGKE TGKFSSSIGF SSPSSYLLKG CR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-118	MYB family protein