PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98835.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 590aa MW: 64300.2 Da PI: 6.1165

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2.1e-30	258	317	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ PIM98835.1 258 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCAEDMSILITTYEGTHNHP 317 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
METSLHKSES NCDEESCGEE IVLQVGAGKG VQDDDEKNLK NLNCSNEGQA MTKVERSSPH 60 ESESRSSSSA KRKQRDIDKL ESAKAEMDEV MEENQRLKMY LDRILKDYRT LEMRYRDVIQ 120 QEARRDPHIV PNTHDHDHHK EESDELIDLS LGISSSDRLK DDHRKTPRNE NLEGGDKEGT 180 LTLGLDCKFE ESKKLLVEAS PNPSLENSLE EVKEDAGDTW PPKAMKNVGD GGDDEISQQN 240 PAKRARVSVR IRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTVAPSC PVRKQVQRCA 300 EDMSILITTY EGTHNHPLPI SATAMASTTS AAAAMLMSGS STSTTGPSSS STTSVATTNL 360 NGLNFYLSDN SRPKVPFYLP NSSISSSSSY PTITLDLTSS SSSSSSHLTR LGNFPPRYSA 420 TNLNFSSLES NPLPISWSNG VLTYGSQPFN KNQTPASLSF GPQSHETLYQ SYLQKAIPNP 480 SQQSLPPDTI AAATKAITSD PSFQSALAAA LTSIIGSGSS NPTTLGNQNA VEKSSQLNPI 540 KPSEPFPILS SFPSTSNPTK CAPSFLRKSS SSTTNSQPSG LTFLSPTFPF

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

METSLHKSES NCDEESCGEE IVLQVGAGKG VQDDDEKNLK NLNCSNEGQA MTKVERSSPH  60
ESESRSSSSA KRKQRDIDKL ESAKAEMDEV MEENQRLKMY LDRILKDYRT LEMRYRDVIQ  120
QEARRDPHIV PNTHDHDHHK EESDELIDLS LGISSSDRLK DDHRKTPRNE NLEGGDKEGT  180
LTLGLDCKFE ESKKLLVEAS PNPSLENSLE EVKEDAGDTW PPKAMKNVGD GGDDEISQQN  240
PAKRARVSVR IRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTVAPSC PVRKQVQRCA  300
EDMSILITTY EGTHNHPLPI SATAMASTTS AAAAMLMSGS STSTTGPSSS STTSVATTNL  360
NGLNFYLSDN SRPKVPFYLP NSSISSSSSY PTITLDLTSS SSSSSSHLTR LGNFPPRYSA  420
TNLNFSSLES NPLPISWSNG VLTYGSQPFN KNQTPASLSF GPQSHETLYQ SYLQKAIPNP  480
SQQSLPPDTI AAATKAITSD PSFQSALAAA LTSIIGSGSS NPTTLGNQNA VEKSSQLNPI  540
KPSEPFPILS SFPSTSNPTK CAPSFLRKSS SSTTNSQPSG LTFLSPTFPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-72	WRKY family protein