PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98732.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 69aa    MW: 7700.64 Da    PI: 8.495
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.7e-09653347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                      WT+   +l+ +a + + ++   +W+ +ar +g g+t  ++k ++qk+
       PIM98732.1  6 TWTAKQNKLFENALAVYDKEtpdRWENVARAVGGGKTVDEVKCHYQKL 53
                     7*****************99**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    
MGSSSTWTAK QNKLFENALA VYDKETPDRW ENVARAVGGG KTVDEVKCHY QKLVQDIHRI  60
ESGKGPLPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.13e-29MYB_related family protein