PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98719.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 381aa    MW: 41362.3 Da    PI: 8.4177
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.8e-20201250255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  PIM98719.1 201 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 250
                 7********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MCISNVAERR ETDKHVRFPA TGNRENAASG GGAATSVPVP YYMQQQEQPN NLLSSVVASP  60
SLSGYNESPE MSAMVTALTH VVSGQGHNVQ ISGAVTAPSF TDAGSGNFIS FSGNSPSSAH  120
SSSSSGSWAG QKRRHEPEGI YNATAFSDQV QRMYRGFGEL PSNVKLEREA GTSISTHATT  180
VATTEPSTTS HELETGERRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT FDTAEAAARA  240
YDEAALRFRG SRAKLNFPEN ARILPSHQPP TATISAAEAP PPSFFQTTAR EYREYFQLLQ  300
STSDFQPQQP TTLFEQMLYA SSLARFHSQP LNTSSSASPV IASSINSSQP LFSSSSTSSY  360
DSTVLSSGQT IYFQPQNNQQ S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197202ERRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.16e-15ERF family protein