PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98636.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 466aa    MW: 52669.7 Da    PI: 6.1075
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS469.91.3e-143464631374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA++v+sg+le+a+ +L ++s+laspdgd+mqR+a+yf eALa r++++++++yka+++++ s   ++ee+ ++k+f+e  P++k+++++ N
  PIM98636.1  46 LIHLLVTCANHVASGSLENANIALDQISHLASPDGDTMQRIASYFSEALADRILKTWPGVYKAFRSTKIS--VVAEEILVRKMFFEFLPFMKVAFVISN 142
                 689*************************************************************999987..6************************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI ea+ege++vH+iD+++++++QW aL++ L++Rpegpp+lRiT++++    +ke le++++ L++ Ae+l++pf+fn+ ++++le+l++e+Lrvk+
  PIM98636.1 143 QAIIEAMEGEKMVHVIDLNATEPAQWCALIRDLSARPEGPPHLRITAIHQ----QKEVLEQMAHVLTEEAEKLDLPFQFNP-LVSKLENLDIEKLRVKT 236
                 **************************************************....9**************************.5999************* PP

        GRAS 199 gEalaVnlvlqlhrll....................................................desvsleserdevLklvkslsPkvvvvveqe 245
                 gEala+++++qlh+ll                                                     +s++l++ +d++L+++++lsPkv+vv+eq+
  PIM98636.1 237 GEALAISSIMQLHTLLasndvrnrspstpmnvhlqrvaqmnqstlgellekdmvngyspsndsassspLSSMPLPK-IDSFLSALWGLSPKVMVVTEQD 334
                 *************************************************************997755555555555.********************** PP

        GRAS 246 adhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
                 +dhn++s++er++e+l++y+alfd+le+ lpr+s er k+E++llg+ei++++acegaer++rhe+lekW++r++ aGF +vpls++a+ qak+ll+ +
  PIM98636.1 335 SDHNGKSLMERLSESLYFYAALFDCLESALPRASLERLKMEKMLLGEEIRDIIACEGAERKQRHEKLEKWNQRFDLAGFANVPLSYYAMLQAKRLLQSF 433
                 *************************************************************************************************** PP

        GRAS 345 ksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 + dgy+++ee+g++v++W+drpL+svSaWr
  PIM98636.1 434 NCDGYKIKEEHGCVVICWQDRPLFSVSAWR 463
                 *****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MFQEDGSSSV TSSPLQMFPM MSLSPGPMSP YPWLKDLKPE ERGLYLIHLL VTCANHVASG  60
SLENANIALD QISHLASPDG DTMQRIASYF SEALADRILK TWPGVYKAFR STKISVVAEE  120
ILVRKMFFEF LPFMKVAFVI SNQAIIEAME GEKMVHVIDL NATEPAQWCA LIRDLSARPE  180
GPPHLRITAI HQQKEVLEQM AHVLTEEAEK LDLPFQFNPL VSKLENLDIE KLRVKTGEAL  240
AISSIMQLHT LLASNDVRNR SPSTPMNVHL QRVAQMNQST LGELLEKDMV NGYSPSNDSA  300
SSSPLSSMPL PKIDSFLSAL WGLSPKVMVV TEQDSDHNGK SLMERLSESL YFYAALFDCL  360
ESALPRASLE RLKMEKMLLG EEIRDIIACE GAERKQRHEK LEKWNQRFDL AGFANVPLSY  420
YAMLQAKRLL QSFNCDGYKI KEEHGCVVIC WQDRPLFSVS AWRYRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein