PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM98621.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 25066.3 Da PI: 9.5959 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.9 | 4.5e-12 | 104 | 144 | 4 | 51 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV+++ + +W A I++ +k+++lg+ g++eeAa+++++a+ PIM98621.1 104 RGVYYK--NRKWQAAIKVD-----KKQIHLGTVGSKEEAARLYDRAAF 144 9**985..56********4.....5********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MVSIRRRKLL GLCSGRNSSV ATLPQVCEHE HIPENCLEKT KPVSVHSLPL NDGYKSKVEI 60 TLETANGSPD LSASSPSKEQ FPEVKRRKRH RRKHLENQEP FNMRGVYYKN RKWQAAIKVD 120 KKQIHLGTVG SKEEAARLYD RAAFMCGREP NFELSEEEKK ELRNYKWDEF LAITRSAITN 180 KSQRRMRQRK PENDDWEGQH EPNDFSAFED DMLVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 5e-43 | ERF family protein |