PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM98538.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 144aa MW: 16291.2 Da PI: 6.3592 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.1 | 6.5e-11 | 15 | 61 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT eE +++ d+ ++G + +W++Ia+++g ++t+ ++ ++ + PIM98538.1 15 SWTWEENKQFEDCLVEFGDDypdRWSAIAAKLG-TKTAAEVEQHYAVL 61 7*****************99*************.**********9765 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 6e-16 | 89 | 134 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT eE+ l++++ +++G+g+W I++++ k+Rt+ q+ s+ ++y PIM98538.1 89 KPWTDEEHSLFLEGLEKYGKGDWVGISKHVVKTRTPAQVASHAYNY 134 58*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MAKKGSSDGM SEGSSWTWEE NKQFEDCLVE FGDDYPDRWS AIAAKLGTKT AAEVEQHYAV 60 LLEDLDAIEA GLIEPPKYPD KMRNATHGKP WTDEEHSLFL EGLEKYGKGD WVGISKHVVK 120 TRTPAQVASH AYNYFKRQKK GRAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05790.1 | 1e-36 | MYB family protein |