PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM98537.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 134aa MW: 15567.2 Da PI: 4.3597 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.2 | 2.9e-11 | 6 | 50 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT eE +++ d+ ++G + +W++Ia+++g ++++ q++ ++ PIM98537.1 6 SWTWEENKQFEDCLVEFGEDypdRWSAIAAKLG-TKSATQVQQHYA 50 7********************************.**********95 PP | |||||||
2 | Myb_DNA-binding | 41.2 | 3.7e-13 | 79 | 125 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++WT E ++v + ++G+g W++Iar+m k+Rt+ q+ s+ kyl PIM98537.1 79 KPWTDKERRIFVLGLDKYGKGEWNSIARHMVKTRTPAQVASYAAKYL 125 58****************************************99996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MSEESSWTWE ENKQFEDCLV EFGEDYPDRW SAIAAKLGTK SATQVQQHYA ALLEDINAIE 60 AGLIEPPKYE EKKEEDFGKP WTDKERRIFV LGLDKYGKGE WNSIARHMVK TRTPAQVASY 120 AAKYLEEEEE EDNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05790.1 | 3e-30 | MYB family protein |