PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98506.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family E2F/DP
Protein Properties Length: 360aa    MW: 39106.4 Da    PI: 7.2745
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98506.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.21.2e-27107189271
     E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  PIM98506.1 107 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpsnslaspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 189
                 689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MVNHSNSNSS NHEDGGKNPS TISKGGGGGG GGTRSWGTTI SGQSMSTSGS VGSPSSRSEA  60
AMAATASDST FLRLNNLDIQ GDDAGSQGTA GNRKKKRGQR AVGGDKSGRG LRQFSMKVCE  120
KVESKGRTTY NEVADELVAE FTDPSNSLAS PDQQQYDEKN IRRRVYDALN VLMAMDIISK  180
DKKEIQWKGL PRTSLNDIEE LKNERLGLRT RIEKKAAYLE ELEEQYVGLQ NLIKRNEQLY  240
GSGNAPSGGV ALPFILVQTR PHATVEVEIS EDMQLVHFDF NSTPFELHDD NYVLKAMKFC  300
EKPQADGATQ TIPTDGGESS SMANAYQPQM PHPSRSNIPG RPPTSPPLPG ILKARVKHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-143E2F/DP family protein