PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98448.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 204aa    MW: 22566.6 Da    PI: 4.2462
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.6e-182877255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr +k +g++v+eIr p++   r r++lg+++tae+Aa+a +aa  +l+g
  PIM98448.1 28 KYKGVRKRK-WGKYVSEIRLPNS---RDRIWLGSYDTAEKAARAFDAALFCLRG 77
                8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MLKTAADSSS SSSAAAINAV EPRVNELKYK GVRKRKWGKY VSEIRLPNSR DRIWLGSYDT  60
AEKAARAFDA ALFCLRGRNA QFNFPDDPPD IPGGETLAPV EIQSVAQQYA NQPRESDLFR  120
DHAIKVEDEP PSSNSDGPGP IDWSFLDTLG TNGGGNNAGH FSDYGHFYPE PSDMFIPPNF  180
GAQIDDDEDD DFEDGNLPSF LWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13036KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.15e-44ERF family protein