PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98254.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 419aa MW: 46043.9 Da PI: 8.5982

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.4e-12	351	396	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l P+ +k s a++L +AveYIk+Lq PIM98254.1 351 SIAERMRRTRISEKMKKLQDLFPNM----DKQTSTADMLDLAVEYIKDLQ 396 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MFSSETISRD MSRTSSFLLS NPGNQNTNFK PEGGFQKSRE FMGSDFFPNQ TPQQQSSGLA 60 RYRSAPSSFL AALLDSSTEN SSSGDESEAI FSALMNGPGD LNQKNRNQMQ YMKQEVVVEP 120 EPRPCQNGSG QMGYESAVNR GGGAVVGSYS VGMESHVHLR INNANGNSSN LVRQSSSPAG 180 FFNGFGVLGD LGNYRVHNHA KAYSSSSGMS NHMNFSSSGP SSSSRFMPSI PENGNETIIT 240 HNDPENGLLK NVNSSNGREF GVAFPNNSWN DSPFNGMKRN RDGDPKMFSN FNGLESQNGE 300 GRKNAPGLVH HLSLPKTSAE IAEVEKFLQF QPDTVPCQIR AKRGFATHPR SIAERMRRTR 360 ISEKMKKLQD LFPNMDKQTS TADMLDLAVE YIKDLQKQVQ TLNDTKAKCI CPNKNQETS

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MFSSETISRD MSRTSSFLLS NPGNQNTNFK PEGGFQKSRE FMGSDFFPNQ TPQQQSSGLA  60
RYRSAPSSFL AALLDSSTEN SSSGDESEAI FSALMNGPGD LNQKNRNQMQ YMKQEVVVEP  120
EPRPCQNGSG QMGYESAVNR GGGAVVGSYS VGMESHVHLR INNANGNSSN LVRQSSSPAG  180
FFNGFGVLGD LGNYRVHNHA KAYSSSSGMS NHMNFSSSGP SSSSRFMPSI PENGNETIIT  240
HNDPENGLLK NVNSSNGREF GVAFPNNSWN DSPFNGMKRN RDGDPKMFSN FNGLESQNGE  300
GRKNAPGLVH HLSLPKTSAE IAEVEKFLQF QPDTVPCQIR AKRGFATHPR SIAERMRRTR  360
ISEKMKKLQD LFPNMDKQTS TADMLDLAVE YIKDLQKQVQ TLNDTKAKCI CPNKNQETS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	5e-59	bHLH family protein