PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM98208.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 228aa MW: 26251.6 Da PI: 10.333 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.7 | 2.3e-17 | 12 | 59 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+++++++G g W+ ++ + g++R++k+c++rw++yl PIM98208.1 12 KGAWTQEEDDLLKKCIERYGEGKWHQVPLRAGLNRCRKSCRLRWLNYL 59 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.4 | 9e-15 | 65 | 109 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g +T +E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++ PIM98208.1 65 KGYFTRDEVDLIIRLHKLLGNR-WSLIAGRLP-GRTANNIKNFWNTH 109 688*******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MENNGGQVAV RKGAWTQEED DLLKKCIERY GEGKWHQVPL RAGLNRCRKS CRLRWLNYLR 60 PNIKKGYFTR DEVDLIIRLH KLLGNRWSLI AGRLPGRTAN NIKNFWNTHI QKNIRSIRAG 120 LGGETENCTR TKTITKSNII RPRPRTFSKL QVPAGCSTIP DHQPSKKNNK NPNDELQPSS 180 STMSLPRDQG TNDWTNNDPD ECIRWWSNLL EISTHDQNGD ETPFSFSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 3e-63 | MYB family protein |