PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98134.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YA
Protein Properties Length: 302aa    MW: 33248.4 Da    PI: 10.1689
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA95.37.1e-30155209358
   CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 p+YVNaKQy++I++RR+kRa++e e++l +k rkpylh SRh hA+rRpRg gGrF
  PIM98134.1 155 PIYVNAKQYHGIIRRRKKRAEAELENRL-IKLRKPYLHLSRHLHAMRRPRGRGGRF 209
                 9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MTMHTVIFKQ HQGVAHGGLP AVPARWSGLG SQPPPAAYGE AFTLQSKLAS LELSPGRTQF  60
NAANEDQQGL GKGNATQYFT LFSGNYKSAE NGEKTPPETA ANRDYGGHLD LGFGQPLICG  120
KYPHAEQYYG MYSTYGTQIT GRMMLPLSMA TDGGPIYVNA KQYHGIIRRR KKRAEAELEN  180
RLIKLRKPYL HLSRHLHAMR RPRGRGGRFL NMKGSNGSTE KSSPKKGAQE KQMPKPTGSQ  240
MSSEVVQSDG IRSTSPGSEV NSDNLFSRGT ANLHPFEFNH LYPSFQHFPD EGNTGISTYL  300
KV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168173RRRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.21e-38NF-YA family protein