PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98129.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 708aa MW: 78492.7 Da PI: 9.9682

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.4	2.2e-10	18	70	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqkyl 48 W t+E++ll+ av+++G+g W++Ia++++ ++t+ +c++++++++ PIM98129.1 18 TWGTWEELLLAFAVNRHGTGAWDSIASELQkrtsdpnITLTAQNCRLKYLDLK 70 7*****************************99999899*******9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MTKPDGIPPE ANDEMSPTWG TWEELLLAFA VNRHGTGAWD SIASELQKRT SDPNITLTAQ 60 NCRLKYLDLK RRFVSPNDDL DDDGRDDKSG VAESVPLLEE LRKLRVAELR REVQRYDLNI 120 ESLELKMKRM EEERERGSRR EKNESDPENK SQEKRDSEPA AEPATGGEPV AGEDMEKDQL 180 SVNESNSTDP EAEKLRTGEK ASEPARTGGE DVRQDRAGQT SEEPAELKSE PDRKSVREDS 240 CNGSSNSIEE SDRKAKGAPV SDSADLVESE AESDGGGKEA TKENSDVQSS ASRSRKEEGS 300 DKVRRASTSG GEREHEDQSR TAKELSAESQ PLVNFLQAIR AHKFGSMFER RLRSQESSKY 360 QKLVLQHIDL ETVETRLKEG WYSGSRSKFF RDLLLLVNNA LVFFTKNSAE ANAATEIRWL 420 ISKEISQKHA KSDSSSGKQI SLQSLSMPKK EEPDPSHSLM LKPRLPGSII VCRKRSSIAA 480 KASASTDKKK EQTSLLAEEK DTKNADEPKI TKKRTRDRFS SVSANSKKNG KNQGNNSGNK 540 NTVVESSKQQ TKGGSSAQQA EPKSDNKKNQ STLDSKKRGA ANFLNRMKQG SSSNNGVLLD 600 ALKNTPLTSE STSGKGGSEL KKNENNKRGE KKEQTTRRSA ETRQAKEKEK EKEKEKEKEK 660 GSPGKRNVGR PPKRGAAPPP APLGKRSRDR GESESAASKQ PKKRSRKL

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MTKPDGIPPE ANDEMSPTWG TWEELLLAFA VNRHGTGAWD SIASELQKRT SDPNITLTAQ  60
NCRLKYLDLK RRFVSPNDDL DDDGRDDKSG VAESVPLLEE LRKLRVAELR REVQRYDLNI  120
ESLELKMKRM EEERERGSRR EKNESDPENK SQEKRDSEPA AEPATGGEPV AGEDMEKDQL  180
SVNESNSTDP EAEKLRTGEK ASEPARTGGE DVRQDRAGQT SEEPAELKSE PDRKSVREDS  240
CNGSSNSIEE SDRKAKGAPV SDSADLVESE AESDGGGKEA TKENSDVQSS ASRSRKEEGS  300
DKVRRASTSG GEREHEDQSR TAKELSAESQ PLVNFLQAIR AHKFGSMFER RLRSQESSKY  360
QKLVLQHIDL ETVETRLKEG WYSGSRSKFF RDLLLLVNNA LVFFTKNSAE ANAATEIRWL  420
ISKEISQKHA KSDSSSGKQI SLQSLSMPKK EEPDPSHSLM LKPRLPGSII VCRKRSSIAA  480
KASASTDKKK EQTSLLAEEK DTKNADEPKI TKKRTRDRFS SVSANSKKNG KNQGNNSGNK  540
NTVVESSKQQ TKGGSSAQQA EPKSDNKKNQ STLDSKKRGA ANFLNRMKQG SSSNNGVLLD  600
ALKNTPLTSE STSGKGGSEL KKNENNKRGE KKEQTTRRSA ETRQAKEKEK EKEKEKEKEK  660
GSPGKRNVGR PPKRGAAPPP APLGKRSRDR GESESAASKQ PKKRSRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	2e-66	MYB_related family protein