PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98047.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 301aa    MW: 32990.8 Da    PI: 10.4926
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.82.1e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G+g W+tI +  +       R+  ++k++w++
       PIM98047.1  5 KQKWTPEEEAALKAGVLKHGPGKWRTILKDPQfsgvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGAPKQKWTP EEEAALKAGV LKHGPGKWRT ILKDPQFSGV LYLRSNVDLK DKWRNMSVMA  60
NGWGSRERAR LALKRMHPAP KHGESSMGLS ALSQSDDEVG DARPVATSGG SSPNDGPKRS  120
IMRLDNLIME AINNLREPDG SNKTTIAAYI EDQYWAPPNF KRILSAKLKH LAATGKLIKM  180
KRKYKIAATS MLSERRRNPS IPVEGRRRIS PRIDHGDINL MKSQIDLELA RMRSMTPKEA  240
AAAAAQAVAE AEAAMAEAEE AAREAEAAEA DAEAAQAFAE AASKTLKGRN TPRMNVQMIQ  300
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-98MYB_related family protein