PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98035.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 296aa    MW: 32146.1 Da    PI: 5.776
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.3e-10145189554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P++      K + a++L +  +Y+k L
  PIM98035.1 145 HSIAERLRRERISERIKALQELVPSC-----NKTDRAAMLDEILDYVKFL 189
                 99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MATNPTEGYA ADDFLEQILS IPSYAGLSGA DSGTSSDTAS LNTSGSQLHH TPMFPLGLSL  60
DNGRDSVGDT AAFAVKPDRE ALNNNMGNLY PGFDHLQSHS IRHPAPQIQQ PFQGHPTPST  120
AVTVPHPPSI RPRVRARRGQ ATDPHSIAER LRRERISERI KALQELVPSC NKTDRAAMLD  180
EILDYVKFLR LQVKVLSMSR LGGAGAVAQL VADIPLQHID GQTGERGSNQ HVWEKWSNEE  240
TESEVAKLME EDVGAAMQFL QSKSLCIMPL SLAALIYPTN QSDDSPLVKP EPSAPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150155RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.22e-67bHLH family protein