PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98026.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 277aa MW: 31007.3 Da PI: 7.0278

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.3	6.5e-24	48	92	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ PIM98026.1 48 DPEPGRCRRTDGKKWRCSKEAHSDSKYCERHMHRGRNRSRKPVES 92 79****************************************986 PP
2	QLQ	25	5.8e-10	1	22	16	37
QLQ 16 lAyKyLaanqPvPpeLlqaiqk 37 ++yKyL+a++PvPp+L++ i++ PIM98026.1 1 MVYKYLVAGLPVPPDLVLLIRR 22 79****************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MVYKYLVAGL PVPPDLVLLI RRSYEAISAL HFHHPSLGCN SYYGKKFDPE PGRCRRTDGK 60 KWRCSKEAHS DSKYCERHMH RGRNRSRKPV ESQSTSQFLP IAVTHVSTRC SDNSGSFQHM 120 PFYSVVSSQG SSFGSNNKES RYIHGLTADT DEHSFPLEAS GSVSLGSRAG NDTMQLMPSQ 180 VSLFKQKSDS NLLGHSSAQF ESMDLSKQPQ LGQHCFFESN DIGSPEEQQP VHLFFSEWPT 240 TKEESWSNLD DDHNGNVFSS TQLSISIPTT AYTTNDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-35	GRF family protein