PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM97960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | CO-like | ||||||||
Protein Properties | Length: 340aa MW: 37160.4 Da PI: 5.4591 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 26 | 2e-08 | 11 | 43 | 4 | 36 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 + C+ +++ ++ fC+ ++ ++C C ++H PIM97960.1 11 KLCDSCKSASATVFCRADSAFICVACDAKIHAA 43 68*****************************54 PP | |||||||
2 | zf-B_box | 27.6 | 6e-09 | 53 | 98 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ C+ + lC++C +H+ H++vp+ PIM97960.1 53 VWVCEVCEQAPAAVTCKADAAALCATCDRDIHSAnplarrHDRVPV 98 689*****************************66899999999986 PP | |||||||
3 | CCT | 70.1 | 5.7e-24 | 277 | 321 | 1 | 45 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++e PIM97960.1 277 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSE 321 9*****************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MGGETWSLTA KLCDSCKSAS ATVFCRADSA FICVACDAKI HAANKLASRH ARVWVCEVCE 60 QAPAAVTCKA DAAALCATCD RDIHSANPLA RRHDRVPVVP FYDAASATKS SPSAGEEYSE 120 EEAEAASWLL PDPNNKSDGE SESPEYKSAE YLFTDMDPYL DLDLISGEQK PHHVVANNEQ 180 KHYSSDGVVP VQNKNEFGSG QYSGPVVDGF PTYEVDYLGS KPFMYNFTSQ SISQSQVSSS 240 SMEVGVVPDH SAAMADVSDS TFCKNEAIPV PVSGIDREAR VLRYREKRKN RKFEKTIRYA 300 SRKAYAETRP RIKGRFAKRS ELEADSLIAA DASYGVVPSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24930.1 | 6e-95 | CO-like family protein |