PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM97836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | WOX | ||||||||
Protein Properties | Length: 124aa MW: 14222 Da PI: 10.4605 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.8 | 2.8e-21 | 27 | 88 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L elF++ r+p+++++++++++l +++ ++V++WFqN++a+e++ PIM97836.1 27 KCGRWNPTSEQVKVLTELFRSgLRTPTTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 88 568*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 115.8 | 2.1e-37 | 27 | 90 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L+el++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ PIM97836.1 27 KCGRWNPTSEQVKVLTELFRSGLRTPTTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 90 678***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence |
MDDYSAGFRI RTSRGGTGGG GTGTGTKCGR WNPTSEQVKV LTELFRSGLR TPTTDQIQKI 60 SSQLSFYGKI ESKNVFYWFQ NHKARERQKR RRVLVDEDYD INMHLHDHTN KISSTKHKFG 120 DLPI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 89 | 93 | KRRRV |
2 | 89 | 118 | KRRRVLVDEDYDINMHLHDHTNKISSTKHK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11260.1 | 4e-43 | WOX family protein |