PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97737.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SBP

Protein Properties

Length: 317aa MW: 34502.1 Da PI: 8.0176

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132	2e-41	25	101	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls +++yhrrhkvCe+hsk+pvv++ g+eqrfCqqCsrfh+l efDe+krsCr+rL++hn+rrrk+q+ PIM97737.1 25 CLVDGCNADLSLCRDYHRRHKVCEIHSKTPVVTIGGREQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRRKPQP 101 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MESSSFSGSS KRAKAPGNFT PVAHCLVDGC NADLSLCRDY HRRHKVCEIH SKTPVVTIGG 60 REQRFCQQCS RFHSLVEFDE GKRSCRKRLD GHNRRRRKPQ PNDSLSRNSG LVFSSQQGVG 120 GATLLSFSSP QILPSAVVSS SWPGVVKSEN DHMVLYSNNQ QQQLNYIEGQ NSFPECSVHS 180 YNGANQLQFI QSSDGSICPN AASGSSKIIF SDGLNQVVDS GRALSLLSSA APPPPVTREF 240 GLNHESAQSS VHNLHYAGLA QYPFHQESKA VISARDSPHG SSAGASTLHF PEMFQHGTDH 300 EGSSTSGAHQ TLTFMWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	99	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	4e-46	SBP family protein