PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM97694.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | GRAS | ||||||||
Protein Properties | Length: 474aa MW: 51985.8 Da PI: 5.4623 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 450.8 | 8.6e-138 | 106 | 469 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 lv++L++cAeav++++++la+al++++ la ++ +m+++a+yf+eALa+++++ + p+++ e++ s++l++ f+++ P+lkf+h+taN PIM97694.1 106 LVHTLMACAEAVQQENMKLADALVKHVGRLAVSQVGAMRKVATYFAEALARKIYK----I----YPQDSLETSYSDVLQM--HFYDTAPYLKFAHFTAN 194 689***************************************************9....4....4555554556666555..4**************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 qaIle+++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p+++++++l+e+g++La++Ae++gv+fef+ +va++l+dl+ ++L+++p PIM97694.1 195 QAILESFAGATRVHVIDFGLNQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQEVGWKLAQLAESIGVEFEFRGFVANSLADLDANMLDIRP 293 *************************************************************************************************** PP GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgrei 294 E++aVn+v+++hrll++++++++ vL+ +k ++Pk+v++veqea+hn++ Fl+rf eal+yys++fdsl + +l++ ++++i++ +++lgr+i PIM97694.1 294 snVETVAVNSVFEMHRLLARPGAVDK----VLNSIKAMNPKIVTIVEQEANHNGNVFLDRFNEALHYYSTMFDSLeSCGLSQPNSQDIVMTEVYLGRQI 388 999***************99999988....*********************************************8889******************** PP GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 +nvva egaer+erhetl++Wr r+++aGF+p +l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++r+L+++SaWr PIM97694.1 389 CNVVAYEGAERVERHETLAQWRGRMKSAGFEPEHLGSNAFKQASMLLAVFAgGDGYRVEENDGCLMLGWHTRSLIATSAWR 469 ********************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 474 aa Download sequence |
MIQSQIGISG ESSSSNQISF SNDRQAVQQD GAKFIYDDDL RAIPGGAIFS NKQKDVVDSE 60 NENKRMKSST GSEFTEKGSS LAGAADAATA ARPMVLVDSQ ETGVRLVHTL MACAEAVQQE 120 NMKLADALVK HVGRLAVSQV GAMRKVATYF AEALARKIYK IYPQDSLETS YSDVLQMHFY 180 DTAPYLKFAH FTANQAILES FAGATRVHVI DFGLNQGMQW PALMQALALR PGGPPTFRLT 240 GIGPPQPDNT DALQEVGWKL AQLAESIGVE FEFRGFVANS LADLDANMLD IRPSNVETVA 300 VNSVFEMHRL LARPGAVDKV LNSIKAMNPK IVTIVEQEAN HNGNVFLDRF NEALHYYSTM 360 FDSLESCGLS QPNSQDIVMT EVYLGRQICN VVAYEGAERV ERHETLAQWR GRMKSAGFEP 420 EHLGSNAFKQ ASMLLAVFAG GDGYRVEEND GCLMLGWHTR SLIATSAWRL RAAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 0.0 | GRAS family protein |