PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM97576.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 237aa MW: 27250.4 Da PI: 7.9071 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.7 | 7.5e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l +v ++G +W++ ++ g+ R++k+c++rw +yl PIM97576.1 14 KGAWSEEEDNKLRAYVLRYGHWNWRLLPKFAGLQRCGKSCRLRWMNYL 61 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 54.4 | 3e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE++l+ +++++ G++ W++Ia++++ gRt++++k++w+ + PIM97576.1 67 RGNYTKEEEDLIRKLHHEIGNK-WSAIAAKLP-GRTDNEIKNHWHAH 111 899*******************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MVKAAYIDKN GLTKGAWSEE EDNKLRAYVL RYGHWNWRLL PKFAGLQRCG KSCRLRWMNY 60 LKPGVRRGNY TKEEEDLIRK LHHEIGNKWS AIAAKLPGRT DNEIKNHWHA HLNKRTTKRI 120 PKSENFQGEK SCSIITHLEK TEKSEVSSSL SSVDLSSSVE ENCSPGSTSS CFNQGIYDDS 180 AGSSLDPFSG FQESFWTEPF VLDKSDSNID FYNYLLLDED RFFSPNLSSF QYGAINW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 2e-53 | MYB family protein |