PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM97530.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 332aa    MW: 36896.7 Da    PI: 6.3441
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM97530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.61.2e-08299318221
                 --SS-EEEEEEE--TT-SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefp 21 
                  Dg++WrKYGqK+ kg+++p
  PIM97530.1 299 TDGCQWRKYGQKMAKGNPCP 318
                 7*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MAKACGLSFD PDHSIITLLR QGKTHFHNHK LAGKLLFSSM ESPINSPPPP PTIQFPVSLG  60
CPSSDHDRTD NPNEQHKIVG EMDFFGVKQA AEANDGGEED NKTAHLSRPN SVLDFEVHTG  120
LHLRTTANSC RDEAIVDLSR SEKELLLLQA ELERMNSDNQ RLKEMLHHVA EDYNRLRMQF  180
LTLTQQQQRG QQTDRGADEH KDDNGNGSLV PRQFMDLGLA VASNNDDGSL SSSEGRTGQN  240
PSSTVTHDEG VGGEREDPSP DNKVPRLSHS PQSIDQTTEA TMRKARVSVR ARSEAPMITD  300
GCQWRKYGQK MAKGNPCPXW NKGIIINYPL HF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.14e-42WRKY family protein