PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97207.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SBP

Protein Properties

Length: 448aa MW: 50006.1 Da PI: 7.8813

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.5	3.3e-42	148	225	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v+gC++dls+ keyh+rhkvCe+hsk++vv+v+g++qrfCqqCsrfh l efDe+krsCr+rLa+hn+rrrk+q PIM97207.1 148 VCIVQGCNKDLSNSKEYHKRHKVCEIHSKTAVVIVNGIQQRFCQQCSRFHVLPEFDEGKRSCRKRLAGHNARRRKPQV 225 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MESLSYTFEG RGPPFTDDIE LQMDDLVRSR TLLKEWDAFE GMGFVGPDLP EISRKSVVSA 60 QCLENSVDDA NGDLGKSVPS TSTISLNSST EIGMRIPSSA VKTDDEKAET GLKIDKLVTS 120 RESKRHQVSV ENSGKRARIT NLPSQIPVCI VQGCNKDLSN SKEYHKRHKV CEIHSKTAVV 180 IVNGIQQRFC QQCSRFHVLP EFDEGKRSCR KRLAGHNARR RKPQVDNYFG SSLFGTDYVS 240 STSLLFSKIL FGQQCHEPAN QSRHVKLEEE PSRTTQLTLP LKFDHSLPKD LLHLHEMGKR 300 YPSKNCVNSP LSVLESSAGS NSSCALSLLS PQSQNFSTYN PLIFEEHQHT KPSAKMTPKY 360 FTPGICSSSS SEVNRRFHDT CAPLGFGSQE DRLPGETNAP NPKHHPSHEG ANTLDLFQLS 420 LHLQRVEQQK YSSQVKPDDT IFCHSTTT

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MESLSYTFEG RGPPFTDDIE LQMDDLVRSR TLLKEWDAFE GMGFVGPDLP EISRKSVVSA  60
QCLENSVDDA NGDLGKSVPS TSTISLNSST EIGMRIPSSA VKTDDEKAET GLKIDKLVTS  120
RESKRHQVSV ENSGKRARIT NLPSQIPVCI VQGCNKDLSN SKEYHKRHKV CEIHSKTAVV  180
IVNGIQQRFC QQCSRFHVLP EFDEGKRSCR KRLAGHNARR RKPQVDNYFG SSLFGTDYVS  240
STSLLFSKIL FGQQCHEPAN QSRHVKLEEE PSRTTQLTLP LKFDHSLPKD LLHLHEMGKR  300
YPSKNCVNSP LSVLESSAGS NSSCALSLLS PQSQNFSTYN PLIFEEHQHT KPSAKMTPKY  360
FTPGICSSSS SEVNRRFHDT CAPLGFGSQE DRLPGETNAP NPKHHPSHEG ANTLDLFQLS  420
LHLQRVEQQK YSSQVKPDDT IFCHSTTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	9e-48	SBP family protein