PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM97116.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 97aa    MW: 11881.8 Da    PI: 10.8537
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM97116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.92.3e-181158148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+++++++G g W+ ++ + g++R++k+c++rw++yl
       PIM97116.1 11 KGAWTKEEDDRLKKCIEKYGEGKWHQVPPRAGLNRCRKSCRLRWLNYL 58
                     79*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MENNKRVGVR KGAWTKEEDD RLKKCIEKYG EGKWHQVPPR AGLNRCRKSC RLRWLNYLRP  60
NIKRGYFTRD EVDLIVRLHK LLGNRQVFWM HINYREI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.17e-40MYB family protein