PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU31051.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 332aa MW: 37269.4 Da PI: 5.4838

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU31051.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00039	201	223	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C+k+F++ L H +H PHU31051.1 201 YICETCNKVFRSYQALGGHRASH 223 89**********99999998887 PP
2	zf-C2H2	11.9	0.00068	250	272	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C ++Fs+ L H r+H PHU31051.1 250 HECPVCYRVFSSGQALGGHKRSH 272 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEKHKTCKLC SRKFANGRAL GGHMRSHMMN LHTQEKQISH QQQQISDNET ESISLTSWSS 60 EGEEKGKILN FAEVGVDDSV VVLPDKESET ESSRNPTRFK RSKRVRKSRK SNLLRKVTDY 120 SETEQPVSSI SETSPEEDVA HCLMMLSRDK WIVQKEQVGD FYSDDDDEEE EEDEEFKEAN 180 NSDDFGVQVK VVAKTRGRGK YICETCNKVF RSYQALGGHR ASHKKIKVFN SSNNNNEVVE 240 NVVSVEEKIH ECPVCYRVFS SGQALGGHKR SHGIGAGAGA IVSSAKLELS RTDGTSLIDL 300 NLPPPMEDDD EIISQVEVSA VSDAEFMYNI KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	6e-48	C2H2 family protein