PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU30889.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 475aa MW: 54453.2 Da PI: 5.8302

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU30889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.7	6.6e-11	196	242	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h++ E+ RR + ++f+ Lr+l+P++ K++ a+i A+ YI++L PHU30889.1 196 MKHPASEKLRRIHFSDKFQALRTLIPNP-----SKNDRATIIVDAIGYINEL 242 58***********************9.....7*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MYAGESLSFD PTSQQNEVLD EKGLLQNHIP TTCVTNFSMG EELQQKFHSS ENNNMNMQEF 60 GHHDEHTNTV LPCVHPNWEE IGFNPYNNQL LSYPISSSLG HLGGFHQRTE IPSTSTNLFY 120 ELPQLNMPIN LCTQQPSLFK DLFHLSPHGS SYGLDSSGTG SLFTGALYHD GSFHHEFSTG 180 DMINSAAIKK REGNDMKHPA SEKLRRIHFS DKFQALRTLI PNPSKNDRAT IIVDAIGYIN 240 ELKMRVNELK NEIDLKKEMM RMKRQRIVEE DGAMIMEADE DQVVMNKSIM SNWHHQRKCT 300 KNSSTEVDVR VMEDEVSIKL VQQKEMMIKK RMNCLVFVSK ALDELRLDLQ HVAGGLIGDH 360 YSYLFNSKFA SEIGLERKEE XSQGRQQLGD NRHSLGSNAM NVLVCLRDWI RAERRNQGME 420 PEPSDDLKLE EIMTSRENST ESSPMHDFAP VDFDYPMQVP VNINMHELEK MMHNL

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MYAGESLSFD PTSQQNEVLD EKGLLQNHIP TTCVTNFSMG EELQQKFHSS ENNNMNMQEF  60
GHHDEHTNTV LPCVHPNWEE IGFNPYNNQL LSYPISSSLG HLGGFHQRTE IPSTSTNLFY  120
ELPQLNMPIN LCTQQPSLFK DLFHLSPHGS SYGLDSSGTG SLFTGALYHD GSFHHEFSTG  180
DMINSAAIKK REGNDMKHPA SEKLRRIHFS DKFQALRTLI PNPSKNDRAT IIVDAIGYIN  240
ELKMRVNELK NEIDLKKEMM RMKRQRIVEE DGAMIMEADE DQVVMNKSIM SNWHHQRKCT  300
KNSSTEVDVR VMEDEVSIKL VQQKEMMIKK RMNCLVFVSK ALDELRLDLQ HVAGGLIGDH  360
YSYLFNSKFA SEIGLERKEE XSQGRQQLGD NRHSLGSNAM NVLVCLRDWI RAERRNQGME  420
PEPSDDLKLE EIMTSRENST ESSPMHDFAP VDFDYPMQVP VNINMHELEK MMHNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06170.2	3e-39	bHLH family protein