PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU30843.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 162aa    MW: 18470 Da    PI: 4.6439
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU30843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3361.3e-1149133595
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 lt s+v    +l+lpkk ++e   ++++    ++ +   ++W++ +   + ++   +++ W++F+++n+LkegD +vF+l++ s ++ +++
  PHU30843.1  49 LTMSSVKPIYNLYLPKKITNEL--PSTG--APVVLTCGQKKWDMFY--GGVKSNNKFSNEWRKFADDNDLKEGDALVFELSECSARKIHFR 133
                 667888888899*****98666..3333..345667799*******..666666679999*******************985466655554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MEQQLRNQLE MEKGYYNMKQ PEIESSGIPE VDNGEYWPLS GKPYIDMVLT MSSVKPIYNL  60
YLPKKITNEL PSTGAPVVLT CGQKKWDMFY GGVKSNNKFS NEWRKFADDN DLKEGDALVF  120
ELSECSARKI HFRVQILRGD FPAELIPEDE EGANSKNPIV LG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-11B3 family protein