PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU30291.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 366aa MW: 40676.1 Da PI: 6.3726

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU30291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	32	79	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl PHU30291.1 32 KGLWSPEEDEKLMNYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 79 678*******************************************97 PP
2	Myb_DNA-binding	52.4	1.3e-16	85	128	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+v+++ lG++ W+ Ia++++ gRt++++k++w++ PHU30291.1 85 RGAFSPQEEELIVHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 128 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MRKPEHNSSN PSPSTMMKEK EKEKGNKAKL RKGLWSPEED EKLMNYMLTN GQGCWSDIAR 60 NAGLQRCGKS CRLRWINYLR PDLKRGAFSP QEEELIVHLH SILGNRWSQI AARLPGRTDN 120 EIKNFWNSTI KKRLKNNNNN NNHSNNSTPS PNASDSSSDP RALVGGIFPM QGHDVNVMAA 180 FCMDNSSSTT SGSSMQAMVP SNHFNPFPQL DNTSYDISGL VGPVNLGQFG CNGCDGGFLD 240 YGVEETYSMM GLESDEFSVP PLGGVHKSTM GENNNNNSHV NFSSNIVIGA NDYMVEKKIT 300 NGNNNNNQHL MNMSGSSDQS LKVEDYMVGF GNHNHWHGES LRIGEFDWEG LLANVSSLPY 360 LDFQVE

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MRKPEHNSSN PSPSTMMKEK EKEKGNKAKL RKGLWSPEED EKLMNYMLTN GQGCWSDIAR  60
NAGLQRCGKS CRLRWINYLR PDLKRGAFSP QEEELIVHLH SILGNRWSQI AARLPGRTDN  120
EIKNFWNSTI KKRLKNNNNN NNHSNNSTPS PNASDSSSDP RALVGGIFPM QGHDVNVMAA  180
FCMDNSSSTT SGSSMQAMVP SNHFNPFPQL DNTSYDISGL VGPVNLGQFG CNGCDGGFLD  240
YGVEETYSMM GLESDEFSVP PLGGVHKSTM GENNNNNSHV NFSSNIVIGA NDYMVEKKIT  300
NGNNNNNQHL MNMSGSSDQS LKVEDYMVGF GNHNHWHGES LRIGEFDWEG LLANVSSLPY  360
LDFQVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08500.1	4e-67	MYB family protein