PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU29759.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 335aa MW: 37745.7 Da PI: 9.2394 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.9 | 1.8e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l +++++G g+W++ + + g++R++k+c++rw +yl PHU29759.1 14 KGPWTPQEDQKLTYYIEKHGCGSWRALPTKAGLKRCGKSCRLRWINYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.4 | 5.2e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia ++ +Rt++++k++w+++l PHU29759.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLA-NRTDNEIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 335 aa Download sequence |
MGRSPCCEKV GLKKGPWTPQ EDQKLTYYIE KHGCGSWRAL PTKAGLKRCG KSCRLRWINY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLANRT DNEIKNYWNT HLKKRLTKMG 120 IDPNTHKPRS NFGSANLSHM AQWENARLEA EARLVRESKK QQEEIILINN NINNYNNIHF 180 GTNNLGTKNV LLPLQTKLPS LPCLDVLKAW EGGANWSNRP KIKKEKFFDN FPTSSTSLSN 240 NNLLLMVPSN NNNNNNILGA GLVNTCLVGA GSFLGNNINE ISSYSSYPCL NDIQGFTQLE 300 SVVGSCQDDY DNNDNNYWNT ILNSCTSLAD GSPVF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G15310.1 | 2e-93 | MYB family protein |