PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU29562.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 181aa MW: 20384.6 Da PI: 10.4042 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.7 | 2.6e-17 | 53 | 104 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++y GVr++ +g ++AeIrdp + k +r +lg++ t+e+Aa a+++a+ k++g PHU29562.1 53 TRYIGVRRRQ-WGTFAAEIRDP---NrKGARLWLGTYQTPEDAALAYDQAAFKIRG 104 589****887.**********9...6566*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MSYSSNNLEL PNSPNSSFGS SPSTRSHEKS ESEEDTNVPT VAAREDKALG DWTRYIGVRR 60 RQWGTFAAEI RDPNRKGARL WLGTYQTPED AALAYDQAAF KIRGSKARLN FPHLIGSNMP 120 EPARLTARRR TRSPEPSDAS STSSENGTRK RKIDVINSIA KAKYFCHSYL KGREFSVQNN 180 W |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 8e-37 | ERF family protein |