PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU29550.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 25242.7 Da PI: 10.7176 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.5e-19 | 78 | 134 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse..ng..krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++Ae+rdp+ n+ + r++lg++ t+e+Aa a+++a+ kl+g PHU29550.1 78 RYRGVRRRR-WGKFAAEVRDPTRkrNNnnNNNRVWLGTYETPEDAALAYDRAAYKLRG 134 59****777.**********65558556555*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 220 aa Download sequence |
MKKKLREAIG SSHKVYCCIY KVEKKASYKK KSFIKEIISP FNNITSAIGY SSDDSTPSPT 60 PILSTVERRA DAPPTWWRYR GVRRRRWGKF AAEVRDPTRK RNNNNNNNRV WLGTYETPED 120 AALAYDRAAY KLRGTKALLN FPHLICSNVT DDHYNRVRPK RRLGLNSLDE ISIASTKTST 180 TNEYSPRAKR RNVELINSLA KANLNSHSIM ERFNQLGASC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G44840.1 | 2e-23 | ERF family protein |