PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU29231.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 270aa MW: 30919.3 Da PI: 9.8605 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.5 | 5.6e-31 | 23 | 71 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifs +gklye+ PHU29231.1 23 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEF 71 79**********************************************9 PP | |||||||
2 | K-box | 101.5 | 1.1e-33 | 94 | 183 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 e++++s++qe++kLk++ e Lqr+qRhllGedL++Ls+keLq+Le+qLe +l + R++K+++++eq+eel++ke+ l + nk+L+ k+ PHU29231.1 94 CGERETQSWYQEVSKLKAKFEALQRTQRHLLGEDLGTLSVKELQNLEKQLEGALAQARQRKTQIMMEQMEELRRKERHLGDVNKQLKIKV 183 56889*********************************************************************************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MVRFLLPQKR RKTKMGRGRV ELKRIENKIN RQVTFSKRRN GLLKKAYELS VLCDAEVALI 60 IFSGRGKLYE FGNAGITKTL ERYQRCCINP QDNCGERETQ SWYQEVSKLK AKFEALQRTQ 120 RHLLGEDLGT LSVKELQNLE KQLEGALAQA RQRKTQIMME QMEELRRKER HLGDVNKQLK 180 IKVSLELSSF ETEGQGLRAL PNFPWSCNAS AEAGSSSFHV HHHSQSNHMD CDQPDPVLQI 240 GYQQYMSADG ASGSRSNMAI ENNIIHGWGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 1e-102 | MIKC_MADS family protein |