PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29211.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 304aa    MW: 33735.8 Da    PI: 8.2582
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29211.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62.1e-204191256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  PHU29211.1 41 KFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 91
                799******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MAPGSETTTT TITTNTNTNT NTSTIKSSSS STQISKSITR KFVGVRQRPS GRWVAEIKDS  60
SQRVRLWLGT YDTPEEAARA YDEAARALRG ENARTNFAPS APNNPNTNDQ SNVLQCYHDT  120
KHGLSFSSIK AKLSKNLQSI MAKNSENKSS SKSRVSDHFT FARIFHSKNS YDHQYQNHHH  180
VDMKKIEKVV QPSIRVLPHH VTDNDNNNIN DSYTSWENSS VSDCSSEWTA FRQLGLESDN  240
GSDGSEFFLG SDPMAGWISS PDIMSSSSTT EGSRSKRFKV SSSVMVPPTF SESPLHGDNY  300
EGFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-18ERF family protein