PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28799.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 502aa MW: 55612.3 Da PI: 4.5949

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.9	2.1e-35	34	125	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sws++ nsfvv+d+ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ w+F+++ F +g+k+ll++i PHU28799.1 34 FLMKTYDMVDDPSTDKIVSWSSTDNSFVVWDPPEFARELLPKYFKHNNFSSFVRQLNTYGFRKVGSDL---------WKFSNDGFIRGQKHLLRNIS 121 9******************999************************************9887.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PHU28799.1 122 RRKP 125 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MGSASMEDAG EASPAPEPSP PAAPMSSSNA PPPFLMKTYD MVDDPSTDKI VSWSSTDNSF 60 VVWDPPEFAR ELLPKYFKHN NFSSFVRQLN TYGFRKVGSD LWKFSNDGFI RGQKHLLRNI 120 SRRKPAHGHS QQQQLHGQSA SVGVCVEVGK FGLEEEVERL KRDKNVLMLE LVKLRQHQQN 180 TDNQMQTVVQ SLHIMEQRQQ QMMSFLAKAV NSPGFLAQFV QQQNESNKLM IERSKKRRIG 240 QDNPSGDLSV SPADGQLVKY QPVMKEAAKA MLRQITKLDS SPRLESLSNS PESLLIGDGL 300 PQCKSLDGGS NNQISGVTLQ EVPPASPQPF ASATSAVAGQ SSFSANIQFS ESSSLVGAQD 360 PPVLLSPSDM IMPEPSQFQE IVPENNMDIN GSETGIDSFM DSILGRNGKL PSEIGTFSPD 420 LQTEWQSTLM DDIGELPSVG DPFWEKFLQN LFPTETKEMD SLEVEDIEST ETKPLENGRD 480 NVQHMEDLTE QMEQLTSNSK KV

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MGSASMEDAG EASPAPEPSP PAAPMSSSNA PPPFLMKTYD MVDDPSTDKI VSWSSTDNSF  60
VVWDPPEFAR ELLPKYFKHN NFSSFVRQLN TYGFRKVGSD LWKFSNDGFI RGQKHLLRNI  120
SRRKPAHGHS QQQQLHGQSA SVGVCVEVGK FGLEEEVERL KRDKNVLMLE LVKLRQHQQN  180
TDNQMQTVVQ SLHIMEQRQQ QMMSFLAKAV NSPGFLAQFV QQQNESNKLM IERSKKRRIG  240
QDNPSGDLSV SPADGQLVKY QPVMKEAAKA MLRQITKLDS SPRLESLSNS PESLLIGDGL  300
PQCKSLDGGS NNQISGVTLQ EVPPASPQPF ASATSAVAGQ SSFSANIQFS ESSSLVGAQD  360
PPVLLSPSDM IMPEPSQFQE IVPENNMDIN GSETGIDSFM DSILGRNGKL PSEIGTFSPD  420
LQTEWQSTLM DDIGELPSVG DPFWEKFLQN LFPTETKEMD SLEVEDIEST ETKPLENGRD  480
NVQHMEDLTE QMEQLTSNSK KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-117	HSF family protein