PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28776.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 290aa MW: 32895.8 Da PI: 9.6301

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.7	2.3e-32	187	240	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PHU28776.1 187 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 240 9****************************************************7 PP
2	Myb_DNA-binding	47.4	4.5e-15	188	239	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PHU28776.1 188 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 239 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MELFPAQPDL SLKISPPNIK PSSSSTNWKR KTTSSTEDEN LDLGFWKRAM VESTNSMLNN 60 NSNTSSCFEL SLSNNPTKPN NYSCDPNSSH HLQNYILQQN QRIITTRELG FLMQPIRGIP 120 VYHQKPFDNT ITTFPIPSSS NCSILNNINN NNTITSCAST SPNFQQGGFL RSRFYSRFPG 180 KRSTRAPRMR WTSTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT 240 VKTTDRAASS GQSDTSEELI VETEEYLRKS EITIQQGRRN IHQNNDFQGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	4e-47	G2-like family protein