PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28643.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 342aa MW: 38118 Da PI: 7.1013

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.9	4.2e-14	122	173	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ PHU28643.1 122 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 173 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MALEALSTNE LISFIIYDTI STTTTTNNIN LDDENALLFT HNHHDENNNN AYLLKPQDFA 60 TTPPLDQQYS STAVSMPPPQ TSTRGRVVKN NLAVAAQGGG GGRKKRRRRP KICKNKEEAE 120 NQRMTHIAVE RNRRKQMNEH LAVLRSLMPE SYVQRGDQAS IVGGAIEFVK ELEHILQSLE 180 SKKFILLQQQ QRGIGTDDGG CDGEAPHTTS GEISAPTTEY FSTPFAQFFS YPQYTCSQIP 240 NKYTSKSKAA IADIEVTLIE THANVRILSR RRFRQLSKLV AAFQSLYLTV LHLNVTTLDP 300 LVLYSINAKV EEGCQLNSAD DIAGAVHHML RIIEEEAATL SC

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MALEALSTNE LISFIIYDTI STTTTTNNIN LDDENALLFT HNHHDENNNN AYLLKPQDFA  60
TTPPLDQQYS STAVSMPPPQ TSTRGRVVKN NLAVAAQGGG GGRKKRRRRP KICKNKEEAE  120
NQRMTHIAVE RNRRKQMNEH LAVLRSLMPE SYVQRGDQAS IVGGAIEFVK ELEHILQSLE  180
SKKFILLQQQ QRGIGTDDGG CDGEAPHTTS GEISAPTTEY FSTPFAQFFS YPQYTCSQIP  240
NKYTSKSKAA IADIEVTLIE THANVRILSR RRFRQLSKLV AAFQSLYLTV LHLNVTTLDP  300
LVLYSINAKV EEGCQLNSAD DIAGAVHHML RIIEEEAATL SC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	109	RKKRRRR
2	104	109	KKRRRR
3	123	134	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	8e-78	bHLH family protein