PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU28636.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 215aa MW: 24816.4 Da PI: 10.0138 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58 | 2.1e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l d+++ G +W +I+++ g++R++k+c++rw +yl PHU28636.1 15 KGPWTPDEDKKLMDYITNNGHTNWQLIPKKAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 1e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+e+++ ++ lG++ W++Ia++++ gRt++++k++++++l PHU28636.1 68 RGAFSFEEEEIIISLHSILGNK-WSRIASHLP-GRTDNEIKNFYNTHL 113 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MGRYPCFKVD EDLKKGPWTP DEDKKLMDYI TNNGHTNWQL IPKKAGLNRC GKSCRLRWTN 60 YLRPDIKRGA FSFEEEEIII SLHSILGNKW SRIASHLPGR TDNEIKNFYN THLRKKLLRL 120 GIDPRTHKPI SDLNFLINLS HQFPSKHNLF INNPLAYALK LQAQVTEIAK LQQLLQDLYA 180 PINTNIPLLP SNFQENNFAT SSSHVITTNV STNTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10280.1 | 2e-66 | MYB family protein |