PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28163.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 304aa    MW: 34285.6 Da    PI: 8.5404
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28163.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.6e-18110160256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p +   r r++lg++ tae Aa a+++a+ kl+ge
  PHU28163.1 110 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYETAEAAAYAYDRAAYKLRGE 160
                 59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MDKFQENNTM SSIYDEGARI RSSLSQLILT SGTNTFDTIF SHYQETNQMA STTPVFEPLG  60
SSVYLRQRDL LHKFCQENIA NIPLPTTSKT SPFRNSLYTQ GYNFQEKKKL YRGVRQRHWG  120
KWVAEIRLPQ NRMRVWLGTY ETAEAAAYAY DRAAYKLRGE YARLNFPNVR DPSKLGFGDG  180
ERMNAVKNAV DAKIQAICQK VKREKAKKAA KKKSENESKV KETMESSSST TTTTTTTTSS  240
LVGGCGDVIS PSVSEDGLWK SEDSTCSVFG DCLKEPLMES EFDSCSLARM PSFDPELIWE  300
VLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.15e-60ERF family protein