PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28016.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 915aa MW: 103980 Da PI: 7.8458

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.2	5.9e-13	728	771	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + ErrRR++iN++f L ++lP++ K++K++ L +++eY+k+L+ PHU28016.1 728 ISERRRREKINERFMHLASMLPTS-----SKVDKVSLLDETIEYVKELE 771 67*******************8.....7**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 915 aa Download sequence
MYDGAKTKVR TAGGDSEHFT VQTGLHQGST LSPFLFVVVM DVLTRRIQGE VPWCMLFADD 60 VVLIDETRGG VSDKLEVWRQ TLESKGFRVS RSKTEYVECK FNDVRRENEV VVKLESQESN 120 GEIDEDVSHC IGAGWMKWKF ASGVLCDKKV PPKVKGKFYR AVVRPTMLYG AECWPVKNSH 180 IQKMRVAEMR MLRWMCGLTR GDRVRNENIR EKVGVTPVEC KMREARLRWF GHVKRRGVDA 240 PVRRCERLAL DDFKWGRGRP KKYWGEVIRR DMEQLQLTED MTLDRKCHIG EVKVEAFFFE 300 MAMGHQDQDG VPDNLRKQLA LAVRGIQWSY AIFWSTPVTQ PGVLEWSDGY YNGDIKTRKT 360 VQAEEVNEDE LGLQRTEQLR KLYSSLLTGE SEEDLQPQVK RPSAALSPED LTDTECLKFI 420 NNAPFSFVLS VDRKLPGKTL ATNETIWLCN AHQAESRVFS RSLLAKARGV IELGVTELVL 480 EDPNLIQQIK NSFLEADQSV ISKRPNYVSN DRNIVSQKLF YNILENDVYP VEINNSSPHD 540 SSNGFVANQE AEDSLMVVDV IGETSQAQSW KFMDDNMSNG ANDSLNSSDC ISQNNANCEK 600 LSPLSSGEKD TKPCPLDRQE HDQKKLHPSD HQGDDAQYQA VLSTLLKSSD QLTLGPHFRN 660 SNKKSSFVGW KNNIQTPRIG TAQKLLKRVL LEVPRMHGGV VHKISKENRR KNNLLRPEVD 720 DIDKNRVISE RRRREKINER FMHLASMLPT SSKVDKVSLL DETIEYVKEL ERRVQDLEAR 780 SARRSNDTAE QTSDNCGTSK FNDIKVSLPK KRKACDMDEI EPENCNGLLK GSSADSIVIN 840 MIDKEVSIKM RCLWSEGLLL KIMEALTNLQ MNCHTVQSSN IEGILSIAIE SKSAGSKKVA 900 VGTIREALQR VVWNS

Sequence ? help Back to Top

Protein Sequence Length: 915 aa Download sequence

MYDGAKTKVR TAGGDSEHFT VQTGLHQGST LSPFLFVVVM DVLTRRIQGE VPWCMLFADD  60
VVLIDETRGG VSDKLEVWRQ TLESKGFRVS RSKTEYVECK FNDVRRENEV VVKLESQESN  120
GEIDEDVSHC IGAGWMKWKF ASGVLCDKKV PPKVKGKFYR AVVRPTMLYG AECWPVKNSH  180
IQKMRVAEMR MLRWMCGLTR GDRVRNENIR EKVGVTPVEC KMREARLRWF GHVKRRGVDA  240
PVRRCERLAL DDFKWGRGRP KKYWGEVIRR DMEQLQLTED MTLDRKCHIG EVKVEAFFFE  300
MAMGHQDQDG VPDNLRKQLA LAVRGIQWSY AIFWSTPVTQ PGVLEWSDGY YNGDIKTRKT  360
VQAEEVNEDE LGLQRTEQLR KLYSSLLTGE SEEDLQPQVK RPSAALSPED LTDTECLKFI  420
NNAPFSFVLS VDRKLPGKTL ATNETIWLCN AHQAESRVFS RSLLAKARGV IELGVTELVL  480
EDPNLIQQIK NSFLEADQSV ISKRPNYVSN DRNIVSQKLF YNILENDVYP VEINNSSPHD  540
SSNGFVANQE AEDSLMVVDV IGETSQAQSW KFMDDNMSNG ANDSLNSSDC ISQNNANCEK  600
LSPLSSGEKD TKPCPLDRQE HDQKKLHPSD HQGDDAQYQA VLSTLLKSSD QLTLGPHFRN  660
SNKKSSFVGW KNNIQTPRIG TAQKLLKRVL LEVPRMHGGV VHKISKENRR KNNLLRPEVD  720
DIDKNRVISE RRRREKINER FMHLASMLPT SSKVDKVSLL DETIEYVKEL ERRVQDLEAR  780
SARRSNDTAE QTSDNCGTSK FNDIKVSLPK KRKACDMDEI EPENCNGLLK GSSADSIVIN  840
MIDKEVSIKM RCLWSEGLLL KIMEALTNLQ MNCHTVQSSN IEGILSIAIE SKSAGSKKVA  900
VGTIREALQR VVWNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	730	735	ERRRRE
2	731	736	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-149	bHLH family protein