PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27965.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 282aa MW: 31540 Da PI: 8.5728

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.5	8.2e-40	37	98	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 k++ ++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknkksss PHU27965.1 37 KDQVVNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKKSSS 98 78999*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MDTANWPQEI VVKPMEEIIG SSKPNNCVER KLVRPQKDQV VNCPRCNSTN TKFCYYNNYS 60 LSQPRYFCKT CRRYWTEGGS LRNIPVGGGS RKNKKSSSSN NNNNSNINHV IINNPLMKKL 120 PDLIVPPLIR RDVEEYPERH FGNRPDNSTV LPQHHHDQNP SKIIHEGSQD LNLGFSSDFK 180 TITELIQVAN YDGGNKDNNN STNNISTLPP PSEPSSPAFS QLPSLNFSLD HHGLGNNNVH 240 SGYGVFFPFV GLKQVSNASD HVRDQSTNNG YWNGMLGGGG SW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	3e-45	Dof family protein