PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU27964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 260aa MW: 29813.9 Da PI: 8.7444 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.2 | 5e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ +Ed ll ++++q+G g+W++ + g+ R++k+c++rw +yl PHU27964.1 14 KGPWSSQEDSLLTNYINQHGEGHWRSLPLNAGLLRCGKSCRLRWVNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.9 | 3.5e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++Ed+l+v+++ +lG++ W++Ia +++ gRt++++k++w+++l PHU27964.1 67 RGNFCEDEDDLIVRLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112 78999*****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MGRAPCCAKE GLRKGPWSSQ EDSLLTNYIN QHGEGHWRSL PLNAGLLRCG KSCRLRWVNY 60 LRPGIKRGNF CEDEDDLIVR LHSLLGNRWS LIAGRLPGRT DNEIKNYWNT HLVKKLKNTG 120 IDPKPLKNFP RRKKTQKEGK KCKSQNSKGQ SVQVEKIKVF APKPIRISCV NSRDNSFEND 180 TLSTSTCSSN SNFEEVDVRK EKENEVNFLA RDLDFGELLK GDEFCDEFLM GESCNFSKCP 240 FSLDDNMVEK VYQEYLLLLS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 131 | 158 | RRKKTQKEGKKCKSQNSKGQSVQVEKIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16720.1 | 2e-65 | MYB family protein |