PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU27936.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRF | ||||||||
Protein Properties | Length: 241aa MW: 26781.1 Da PI: 9.4398 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 75.6 | 5.2e-24 | 148 | 191 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rC+RtDGKkWRCsr+v +++k+CErH h+++ rsrk++e PHU27936.1 148 DPEPWRCKRTDGKKWRCSRDVAPDQKYCERHAHKSKPRSRKHVE 191 79****************************************97 PP | |||||||
2 | QLQ | 37.5 | 7.1e-14 | 89 | 124 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Qlq++ +Q + Ky++a++PvPp+Ll+++++ PHU27936.1 89 PFTASQLQEFQRQSIICKYIMASMPVPPQLLLPLPN 124 9********************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MGNGENSELL DLKMKTSTES SYPYKSSLFI SPSSHSGDDG GSGCGGPGDF VGSGIYDVVS 60 SDAALSSRPL QQPFNYTARG SMGLFGKVPF TASQLQEFQR QSIICKYIMA SMPVPPQLLL 120 PLPNHPSPAH LPQSNTSGLD LKFSSGSDPE PWRCKRTDGK KWRCSRDVAP DQKYCERHAH 180 KSKPRSRKHV EIHNSNSNSN RHPPAPKSNN KHHSLQFPSD QTRFGSFKFQ FFMWTLLDFL 240 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53660.1 | 1e-25 | GRF family protein |