PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27918.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 477aa    MW: 52397.1 Da    PI: 6.6231
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27918.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B31001.4e-31105209199
                 EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 
                 f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  + +l+
  PHU27918.1 105 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGvGElGKDRLF 203
                 89***************************966778999*************************************************666999999999 PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 + ++r+
  PHU27918.1 204 IDWRRR 209
                 999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MNFFSGGHGF NDQGSSKGTH PFSNSSSSSS QKILVPFSYH QQRRSWLSSS SITSNSSEDN  60
TDPVMMDTPP STNLCEGDPV DENHLLELGV GESNAMALIE REHMFDKVVT PSDVGKLNRL  120
VIPKQHAEKY FPLDSSTNEK GLLLNFEDRN GKPWRFRYSY WNSSQSYVMT KGWSRFVKEK  180
KLDAGDIVSF QRGVGELGKD RLFIDWRRRP DAPDHLFTTH LPLSHHFSNN NFYRSNIHYP  240
AAASAWNRPL FLQPSPSDSS YLHSRMMMEP AAGSMSCQQQ SYSPHSNSAY GSVGNCPNYY  300
YDVTCNFNNM NSNSATVVNG NPPPSGSLVY LRSGSAAAAA AQVPQQVGLM QRCTSSSTST  360
STVGGSGRIV EPVVFDLVPV VQGKAAAKRL RLFGVNMDCS ISDSDESCEI MSSSSSLPSP  420
AATTTYSHVP QFLSSSPPIP SLQCRTFNSY EVNPPPAATE EEAFDKGKTS MSLDLDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.14e-70B3 family protein