PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU27288.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 330aa MW: 37446.8 Da PI: 7.2328 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.6 | 5.9e-18 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ +++q+G+g +W t ++++g++R++k+c++rw++yl PHU27288.1 14 RGPWSPEEDSKLKAYIEQHGTGgNWITLPQKVGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.4 | 2.8e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ PHU27288.1 69 GEFTDEEDTIICTLYMSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDSKLKAYIE QHGTGGNWIT LPQKVGLKRC GKSCRLRWLN 60 YLRPNIKHGE FTDEEDTIIC TLYMSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLLC 120 NKQRKDHRPR TGYNHNKVDM MKEQEDFFAT HQTTNNAYSW SPQQILFSTL IAPQNHDVAE 180 CSANSHNFQY SSTDQAYFSQ DQLCQISSTN HLASMNPVNG ATCNSSMMVS SGAYYPSNGF 240 CNNGLQEYNN YISVGLDHDV LNSTSTAHSQ QVDKSVLEMV NSSTISTTSQ DQSTSWEELS 300 PLVNYPPSVF ETVSPYYVFE EPRYLGLLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 2e-79 | MYB family protein |