PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU27166.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 305aa MW: 34984.4 Da PI: 6.0037 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 114.9 | 4.1e-36 | 54 | 155 | 2 | 100 |
NF-YC 2 lksfwekqiek..atdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 l fw++q e+ ++d+k +helP++ri++ +k++++vkm+sa++ vll+ka e+filelt r+w+++e+ krrtlk++dia a+ + + fdfl divp PHU27166.1 54 LSCFWKRQKEEilHSDLKrKHELPISRIRRAMKSNDQVKMVSAHSTVLLAKAIEMFILELTRRAWMQSEQEKRRTLKRCDIARAIRNEELFDFLSDIVP 152 778*****9983347999899*****************************************************************************9 PP NF-YC 98 rde 100 ++ PHU27166.1 153 LQN 155 876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MDFNSSSMEL PKSSSALSSD MQRPVHMQKS MPSDKKIQQD EDERDPRFML KEELSCFWKR 60 QKEEILHSDL KRKHELPISR IRRAMKSNDQ VKMVSAHSTV LLAKAIEMFI LELTRRAWMQ 120 SEQEKRRTLK RCDIARAIRN EELFDFLSDI VPLQNYKVQE AANDGQGNEL HPAHQMVKPN 180 NNSVHAEAND GQGNEFPPTH QLVQPNNIPV QQQTNDGQGN MFDPAHQFVQ PNNIPYQFQV 240 KEAANGGQGN EFHPVYQMVQ PNNIPASFTS TQGIPAPLMP PPLFNFSPED EFIIDGFLMD 300 YKEGL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 128 | 132 | TLKRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 3e-35 | NF-YC family protein |