PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27139.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 660aa MW: 75187.6 Da PI: 5.9376

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27	7.9e-09	573	616	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++RR+ri +++ L+el+P+ K++ +++LekA+ Y+k Lq PHU27139.1 573 IAAKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAIGYVKFLQ 616 5679*****************5.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MKLGFPQFKG DEDSTSWLCR AEQFFQFHEI PDEERVFIAS FLLEGEAHMW FQLLRKDILE 60 VSWNEFKEGL HKAEIEKIVT DLLKSEFIRP STSPYSSPVI LVKKHDGSWR MCVDYRALNK 120 ITIKDKFSIP VIDELLDELH GAQFFSKLDL RSGYYQVRIH PADVEKTAFR THEDNYEFFV 180 MPFGLTNTPS TFQSLMNQIA GPLMKMLKKD GFAWFSNAEE AFGNFGFGSR RAEVEALSLR 240 QTICEYKKGK ENIVADALSQ RYEDDCNGSL LTISQPIPVW LETIKEEHSS SPKIQEIIHL 300 VQIEETVGPW EFQDRVLYFK KEFTWMRILL HYSQYTIFFI NNMSMALAKE HDIMSDPKMG 360 LVDNYDQYYE GHEFGMNDDS SPELYGINEE PPKSIFEECD HSEKTSPKIA KNFALSSSNS 420 SLSSPSSSTS NGHSVINFKG GYGNFMHSAN GSFLSFDQSE RFCPNPRMIS GNQVEGSVWE 480 DNNLHYHNSL TPKGSSNTSP RVINENSNNN GMPYGWLNSE TNASTANHVE ESCFNKRLHT 540 EESMQTNKKQ CTAASKKGKT NNNSIATKDP QSIAAKNRRE RISERLKILQ ELVPNGSKVD 600 LVTMLEKAIG YVKFLQLQVK VLATDEFWPS QGGKAPDISQ VKEAIDAILA TQRGRNSTSK

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MKLGFPQFKG DEDSTSWLCR AEQFFQFHEI PDEERVFIAS FLLEGEAHMW FQLLRKDILE  60
VSWNEFKEGL HKAEIEKIVT DLLKSEFIRP STSPYSSPVI LVKKHDGSWR MCVDYRALNK  120
ITIKDKFSIP VIDELLDELH GAQFFSKLDL RSGYYQVRIH PADVEKTAFR THEDNYEFFV  180
MPFGLTNTPS TFQSLMNQIA GPLMKMLKKD GFAWFSNAEE AFGNFGFGSR RAEVEALSLR  240
QTICEYKKGK ENIVADALSQ RYEDDCNGSL LTISQPIPVW LETIKEEHSS SPKIQEIIHL  300
VQIEETVGPW EFQDRVLYFK KEFTWMRILL HYSQYTIFFI NNMSMALAKE HDIMSDPKMG  360
LVDNYDQYYE GHEFGMNDDS SPELYGINEE PPKSIFEECD HSEKTSPKIA KNFALSSSNS  420
SLSSPSSSTS NGHSVINFKG GYGNFMHSAN GSFLSFDQSE RFCPNPRMIS GNQVEGSVWE  480
DNNLHYHNSL TPKGSSNTSP RVINENSNNN GMPYGWLNSE TNASTANHVE ESCFNKRLHT  540
EESMQTNKKQ CTAASKKGKT NNNSIATKDP QSIAAKNRRE RISERLKILQ ELVPNGSKVD  600
LVTMLEKAIG YVKFLQLQVK VLATDEFWPS QGGKAPDISQ VKEAIDAILA TQRGRNSTSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66470.1	4e-55	bHLH family protein